SymbC1.scaffold968.7 (968.7)

Aliases : 968.7

Description : Ribosomal protein L4/L1e; 60S ribosomal protein L4, C-terminal domain [Interproscan].

Gene families : OG_01_0002264 (OrthoFinder) Phylogenetic Tree(s): OG0002264_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold968.7
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
PTI_00G01550.1	No alias	60S ribosomal protein L4, C-terminal domain; Ribosomal...	0.02	OrthoFinder
PTI_12G00050.1	No alias	60S ribosomal protein L4, C-terminal domain; Ribosomal...	0.02	OrthoFinder
Sro621_g176640.1	Contig1511.g13781	60S ribosomal protein L4	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004827	proline-tRNA ligase activity	IEP	Enrichment
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0018298	protein-chromophore linkage	IEP	Enrichment
CC	GO:0030076	light-harvesting complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR025755	Ribos_L4_C_dom	276	345
IPR002136	Ribosomal_L4/L1e	25	263

External Links

No external refs found!

SymbC1.scaffold968.7 (968.7)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation