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  5. SymbC1.scaffold9506.2

SymbC1.scaffold9506.2 (9506.2)


Aliases : 9506.2

Description : Transcription factor, GTP-binding domain; Translation elongation factor EFTu-like, domain 2; Haloacid dehalogenase-like hydrolase; Translation elongation factor EFTu/EF1A, C-terminal [Interproscan].


Gene families : OG_01_0000147 (OrthoFinder) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold9506.2
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Cz02g32220.t1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
Cz05g24190.t1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
Dusal.0317s00001.1 33192309 Transcription factor, GTP-binding domain; Translation... 0.02 OrthoFinder
EOD35459 No alias Putative EF-1 alpha/Tu like protein [Ensembl]. 0.02 OrthoFinder
OT_04G01520.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
OT_13G02300.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
Sro1428_g271890.1 Contig3166.g25070 Elongation factor 1-alpha (Fragment) 0.02 OrthoFinder
SymbC1.scaffold5097.1 5097.1 Transcription factor, GTP-binding domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold641.2 641.2 Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
TP05G05990.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.01 OrthoFinder
lcl|BLLF01005123.1_cds_GFH30755.1_25232 HaLaN_29670, GFH30755 Eukaryotic translation elongation factor 1 alpha 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Enrichment
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Enrichment
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
CC GO:0031360 intrinsic component of thylakoid membrane IEP Enrichment
CC GO:0031361 integral component of thylakoid membrane IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 1 154
IPR041492 HAD_2 721 843
IPR004160 Transl_elong_EFTu/EF1A_C 295 382
IPR004161 EFTu-like_2 213 285
No external refs found!