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  5. Cpa|evm.model.tig00020703.20

Cpa|evm.model.tig00020703.20 (tig00020703_g13122.t1)


Aliases : tig00020703_g13122.t1

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL31 component


Gene families : OG_01_0003819 (OrthoFinder) Phylogenetic Tree(s): OG0003819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020703.20
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre12.g489153 30793408 Protein biosynthesis.cytosolic ribosome.large subunit... 0.33 OrthoFinder
Cz10g20060.t1 No alias Ribosomal protein L31e [Interproscan]. 0.33 OrthoFinder
Dusal.0029s00041.1 33203765 Ribosomal protein L31e [Interproscan]. 0.17 OrthoFinder
EOD14536 No alias Ribosomal protein L31e [Interproscan]. 0.12 OrthoFinder
EOD38942 No alias Ribosomal protein L31e [Interproscan]. 0.12 OrthoFinder
OT_10G01980.1 No alias Ribosomal protein L31e [Interproscan]. 0.19 OrthoFinder
PTI_07G02120.1 No alias Ribosomal protein L31e [Interproscan]. 0.16 OrthoFinder
Sro1684_g291000.1 Contig2811.g22545 60S ribosomal protein L31 0.49 OrthoFinder
TP02G04920.1 No alias Ribosomal protein L31e [Interproscan]. 0.42 OrthoFinder
Vocar.0016s0109.1 32897984 Ribosomal protein L31e [Interproscan]. 0.16 OrthoFinder
XM_003055597.1 MicpuC2_24390, 24390 Ribosomal protein L31e [Interproscan]. 0.14 OrthoFinder
lcl|BLLF01004002.1_cds_GFH28711.1_23188 HaLaN_27249, GFH28711 Ribosomal protein L31e [Interproscan]. 0.07 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05819.1_6025 PRW05819 60S ribosomal L31 0.24 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493621.1_4383 KAA8493621 60S ribosomal protein L31 0.18 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010024 phytochromobilin biosynthetic process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0050897 cobalt ion binding IEP Enrichment
BP GO:0051202 phytochromobilin metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000054 Ribosomal_L31e 13 94
No external refs found!