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Aliases : 9481.1
Description : Hypothetical protein
Gene families : OG_01_0000058 (OrthoFinder) Phylogenetic Tree(s): OG0000058_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: SymbC1.scaffold9481.1 | |
| Cluster | HCCA: Cluster_103 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SymbC1.scaffold11335.1 | 11335.1 | Hypothetical protein | 0.04 | OrthoFinder | |
| SymbC1.scaffold1152.4 | 1152.4 | Hypothetical protein | 0.03 | OrthoFinder | |
| SymbC1.scaffold12679.2 | 12679.2 | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| SymbC1.scaffold13830.1 | 13830.1 | Hypothetical protein | 0.04 | OrthoFinder | |
| SymbC1.scaffold1555.1 | 1555.1 | Zinc finger, CCHC-type [Interproscan]. | 0.05 | OrthoFinder | |
| SymbC1.scaffold166.9 | 166.9 | Zinc finger, CCHC-type [Interproscan]. | 0.06 | OrthoFinder | |
| SymbC1.scaffold1771.4 | 1771.4 | Zinc finger, CCHC-type [Interproscan]. | 0.04 | OrthoFinder | |
| SymbC1.scaffold1790.1 | 1790.1 | Hypothetical protein | 0.05 | OrthoFinder | |
| SymbC1.scaffold1947.9 | 1947.9 | Hypothetical protein | 0.04 | OrthoFinder | |
| SymbC1.scaffold2028.3 | 2028.3 | Integrase, catalytic core [Interproscan]. | 0.03 | OrthoFinder | |
| SymbC1.scaffold2072.2 | 2072.2 | Zinc finger, CCHC-type [Interproscan]. | 0.04 | OrthoFinder | |
| SymbC1.scaffold2297.4 | 2297.4 | Hypothetical protein | 0.03 | OrthoFinder | |
| SymbC1.scaffold2374.4 | 2374.4 | Hypothetical protein | 0.07 | OrthoFinder | |
| SymbC1.scaffold280.3 | 280.3 | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| SymbC1.scaffold3082.1 | 3082.1 | Hypothetical protein | 0.05 | OrthoFinder | |
| SymbC1.scaffold3297.5 | 3297.5 | Zinc finger, CCHC-type [Interproscan]. | 0.03 | OrthoFinder | |
| SymbC1.scaffold3612.1 | 3612.1 | Zinc finger, CCHC-type [Interproscan]. | 0.04 | OrthoFinder | |
| SymbC1.scaffold3876.2 | 3876.2 | Zinc finger, CCHC-type [Interproscan]. | 0.05 | OrthoFinder | |
| SymbC1.scaffold4098.6 | 4098.6 | Zinc finger, CCHC-type [Interproscan]. | 0.04 | OrthoFinder | |
| SymbC1.scaffold4165.2 | 4165.2 | Zinc finger, CCHC-type [Interproscan]. | 0.03 | OrthoFinder | |
| SymbC1.scaffold5249.3 | 5249.3 | Zinc finger, CCHC-type [Interproscan]. | 0.03 | OrthoFinder | |
| SymbC1.scaffold5583.1 | 5583.1 | Hypothetical protein | 0.04 | OrthoFinder | |
| SymbC1.scaffold5722.2 | 5722.2 | Zinc finger, CCHC-type [Interproscan]. | 0.03 | OrthoFinder | |
| SymbC1.scaffold6253.2 | 6253.2 | Zinc finger, CCHC-type [Interproscan]. | 0.06 | OrthoFinder | |
| SymbC1.scaffold6954.1 | 6954.1 | Hypothetical protein | 0.04 | OrthoFinder | |
| SymbC1.scaffold7159.1 | 7159.1 | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.04 | OrthoFinder | |
| SymbC1.scaffold7159.4 | 7159.4 | C-5 cytosine methyltransferase; Zinc finger, CCHC-type... | 0.03 | OrthoFinder | |
| SymbC1.scaffold720.6 | 720.6 | Zinc finger, CCHC-type [Interproscan]. | 0.05 | OrthoFinder | |
| SymbC1.scaffold721.4 | 721.4 | Hypothetical protein | 0.06 | OrthoFinder | |
| SymbC1.scaffold7569.1 | 7569.1 | Reverse transcriptase, RNA-dependent DNA polymerase;... | 0.03 | OrthoFinder | |
| SymbC1.scaffold8765.4 | 8765.4 | Hypothetical protein | 0.06 | OrthoFinder | |
| SymbC1.scaffold9803.2 | 9803.2 | Zinc finger, CCHC-type [Interproscan]. | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Enrichment |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| BP | GO:0000270 | peptidoglycan metabolic process | IEP | Enrichment |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Enrichment |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Enrichment |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | Enrichment |
| BP | GO:0006027 | glycosaminoglycan catabolic process | IEP | Enrichment |
| MF | GO:0008488 | gamma-glutamyl carboxylase activity | IEP | Enrichment |
| MF | GO:0008716 | D-alanine-D-alanine ligase activity | IEP | Enrichment |
| MF | GO:0008745 | N-acetylmuramoyl-L-alanine amidase activity | IEP | Enrichment |
| MF | GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity | IEP | Enrichment |
| BP | GO:0009253 | peptidoglycan catabolic process | IEP | Enrichment |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016746 | acyltransferase activity | IEP | Enrichment |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Enrichment |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Enrichment |
| BP | GO:0017187 | peptidyl-glutamic acid carboxylation | IEP | Enrichment |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Enrichment |
| BP | GO:0018200 | peptidyl-glutamic acid modification | IEP | Enrichment |
| BP | GO:0018214 | protein carboxylation | IEP | Enrichment |
| BP | GO:0030203 | glycosaminoglycan metabolic process | IEP | Enrichment |
| MF | GO:0031419 | cobalamin binding | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| BP | GO:0051301 | cell division | IEP | Enrichment |
| MF | GO:0061783 | peptidoglycan muralytic activity | IEP | Enrichment |
| MF | GO:0140299 | small molecule sensor activity | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |