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  5. SymbC1.scaffold9319.3

SymbC1.scaffold9319.3 (9319.3)


Aliases : 9319.3

Description : Hypothetical protein


Gene families : OG_01_0004642 (OrthoFinder) Phylogenetic Tree(s): OG0004642_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold9319.3
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1244.4 1244.4 Hypothetical protein 0.06 OrthoFinder
SymbC1.scaffold12818.1 12818.1 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold14719.2 14719.2 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold38558.1 38558.1 Hypothetical protein 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006109 regulation of carbohydrate metabolic process IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008360 regulation of cell shape IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
CC GO:0009379 Holliday junction helicase complex IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
BP GO:0022604 regulation of cell morphogenesis IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
CC GO:0033202 DNA helicase complex IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!