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  5. SymbC1.scaffold9245.1

SymbC1.scaffold9245.1 (9245.1)


Aliases : 9245.1

Description : Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal [Interproscan].


Gene families : OG_01_0003503 (OrthoFinder) Phylogenetic Tree(s): OG0003503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold9245.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Cre12.g556050 30792151, PRPL9 Protein biosynthesis.organelle translation... 0.03 OrthoFinder
Cz09g09260.t1 No alias Ribosomal protein L9, N-terminal; Ribosomal protein L9,... 0.03 OrthoFinder
OT_02G04410.1 No alias Ribosomal protein L9, C-terminal; Ribosomal protein L9,... 0.03 OrthoFinder
XM_002505028.1 MICPUN_62813, 62813 Ribosomal protein L9, C-terminal; Ribosomal protein L9,... 0.04 OrthoFinder
XM_003060194.1 MicpuC2_59815, 59815 Ribosomal protein L9, C-terminal; Ribosomal protein L9,... 0.02 OrthoFinder
lcl|BLLF01000410.1_cds_GFH11513.1_5990 HaLaN_07021, GFH11513 Ribosomal_L9 domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR020070 Ribosomal_L9_N 64 106
IPR020069 Ribosomal_L9_C 125 208
No external refs found!