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  5. SymbC1.scaffold924.13

SymbC1.scaffold924.13 (924.13)


Aliases : 924.13

Description : Oxoglutarate/iron-dependent dioxygenase; Aminotransferase, class I/classII [Interproscan].


Gene families : OG_01_0000908 (OrthoFinder) Phylogenetic Tree(s): OG0000908_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold924.13
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Cz01g02070.t1 No alias Aminotransferase, class I/classII [Interproscan]. 0.02 OrthoFinder
OT_03G02870.1 No alias Aminotransferase, class I/classII [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60642.1_4599 PRW60642 Alanine aminotransferase 2 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 117 426
IPR005123 Oxoglu/Fe-dep_dioxygenase 1167 1272
No external refs found!