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  5. SymbC1.scaffold921.10

SymbC1.scaffold921.10 (921.10)


Aliases : 921.10

Description : Tetratricopeptide repeat [Interproscan].


Gene families : OG_01_0000105 (OrthoFinder) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold921.10
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
EOD25221 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
XM_003059065.1 MicpuC2_33798, 33798 STI1 domain; TPR repeat [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498140.1_7093 KAA8498140 Small glutamine-rich tetratricopeptide repeat-containing... 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494599.1_3129 KAA8494599 Hsp70-Hsp90 organizing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
InterPro domains Description Start Stop
IPR019734 TPR_repeat 277 309
No external refs found!