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  5. Cpa|evm.model.tig00020693.8

Cpa|evm.model.tig00020693.8 (tig00020693_g13013.t1)


Aliases : tig00020693_g13013.t1

Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF2 component


Gene families : OG_01_0000026 (OrthoFinder) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020693.8
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Cre01.g002300 30788660 Protein modification.protein folding and quality... 0.02 OrthoFinder
Cre01.g037400 30789223 Protein modification.protein folding and quality... 0.02 OrthoFinder
Cre12.g533800 30792269, CYN22 Protein modification.protein folding and quality... 0.05 OrthoFinder
Cz06g14110.t1 No alias Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.03 OrthoFinder
Cz09g30180.t1 No alias Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.02 OrthoFinder
Cz15g12150.t1 No alias Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.02 OrthoFinder
Dusal.0088s00011.1 33203544 Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.01 OrthoFinder
OT_10G01080.1 No alias Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.01 OrthoFinder
Sro191_g082070.1 Contig2614.g21200 Cis-trans isomerase 0.02 OrthoFinder
SymbC1.scaffold5480.2 5480.2 Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.01 OrthoFinder
Transcript_contig_54712 54712 Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.01 OrthoFinder
Vocar.0002s0004.1 32891244 Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.02 OrthoFinder
XM_002502665.1 MICPUN_58982, 58982 Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.03 OrthoFinder
XM_002503827.1 MICPUN_106992, 106992 Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.02 OrthoFinder
XM_002507793.1 MICPUN_107024, 107024 Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.02 OrthoFinder
XM_003055029.1 MicpuC2_50452, 50452 Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.02 OrthoFinder
XM_003055596.1 MicpuC2_8202, 8202 Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.03 OrthoFinder
XM_003056648.1 MicpuC2_8217, 8217 Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.02 OrthoFinder
XM_003058339.1 MicpuC2_17355, 17355 Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.02 OrthoFinder
XM_003058618.1 MicpuC2_44364, 44364 Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.01 OrthoFinder
XM_003064238.1 MicpuC2_30266, 30266 Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.02 OrthoFinder
lcl|BLLF01005104.1_cds_GFH30734.1_25211 HaLaN_29641, GFH30734 Peptidyl-prolyl cis-trans isomerase 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45741.1_1495 PRW45741 Peptidyl-prolyl cis-trans isomerase CYP19-4 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499995.1_8948 KAA8499995 Peptidyl-prolyl cis-trans isomerase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005929 cilium IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0031514 motile cilium IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:0120025 plasma membrane bounded cell projection IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR013260 mRNA_splic_SYF2 117 252
No external refs found!