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  5. SymbC1.scaffold9146.1

SymbC1.scaffold9146.1 (9146.1)


Aliases : 9146.1

Description : Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; CobW/HypB/UreG, nucleotide-binding domain [Interproscan].


Gene families : OG_01_0000111 (OrthoFinder) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold9146.1
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cz03g02050.t1 No alias Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.02 OrthoFinder
Cz03g02060.t1 No alias CobW/HypB/UreG, nucleotide-binding domain [Interproscan]. 0.02 OrthoFinder
EOD05550 No alias CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.02 OrthoFinder
EOD42073 No alias CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.02 OrthoFinder
SymbC1.scaffold2431.4 2431.4 Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.03 OrthoFinder
TP02G08190.1 No alias CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
BP GO:0018298 protein-chromophore linkage IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
CC GO:0030076 light-harvesting complex IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR011629 Cbl_biosynth_CobW-like_C 233 328
IPR003495 CobW/HypB/UreG_dom 6 190
No external refs found!