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  5. SymbC1.scaffold913.4

SymbC1.scaffold913.4 (913.4)


Aliases : 913.4

Description : Ribosomal protein S26e [Interproscan].


Gene families : OG_01_0002849 (OrthoFinder) Phylogenetic Tree(s): OG0002849_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold913.4
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001486.9 tig00001486_g8926.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder
Cre16.g682300 30776938, RPS26 Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 OrthoFinder
Cz08g12070.t1 No alias Ribosomal protein S26e [Interproscan]. 0.07 OrthoFinder
Dusal.0032s00020.1 33186664 Ribosomal protein S26e [Interproscan]. 0.02 OrthoFinder
OT_02G02540.1 No alias Ribosomal protein S26e [Interproscan]. 0.04 OrthoFinder
Sro1334_g263860.1 Contig785.g8790 40S ribosomal protein S26 0.09 OrthoFinder
Transcript_contig_79948 79948 Ribosomal protein S26e [Interproscan]. 0.03 OrthoFinder
Vocar.0018s0140.1 32898717 Ribosomal protein S26e [Interproscan]. 0.02 OrthoFinder
XM_002504425.1 MICPUN_61082, 61082 Ribosomal protein S26e [Interproscan]. 0.05 OrthoFinder
XM_003059864.1 MicpuC2_27736, 27736 Ribosomal protein S26e [Interproscan]. 0.05 OrthoFinder
lcl|VRMN01000031.1_cds_KAA8490355.1_5745 KAA8490355 40S ribosomal protein S26-B 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000892 Ribosomal_S26e 1 92
IPR000892 Ribosomal_S26e 294 404
IPR000892 Ribosomal_S26e 122 179
No external refs found!