Cpa|evm.model.tig00020693.4 (tig00020693_g13009.t1)

Aliases : tig00020693_g13009.t1

Description : Histone H3.3a OS=Lilium longiflorum

Gene families : OG_01_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020693.4
Cluster	HCCA: Cluster_89

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000381.14	tig00000970_g5845.t1	Histone H3.3a OS=Lilium longiflorum	0.04	OrthoFinder
Cpa\|evm.model.tig00000743.9	tig00021071_g17953.t1	Histone H3.3a OS=Lilium longiflorum	0.06	OrthoFinder
Cpa\|evm.model.tig00001007.15	tig00021071_g17953.t1	Histone H3.3a OS=Lilium longiflorum	0.07	OrthoFinder
Cpa\|evm.model.tig00020516.11	tig00020781_g13702.t1	Chromatin organisation.histones.H3-type histone	0.03	OrthoFinder
Cpa\|evm.model.tig00020876.4	tig00020876_g14837.t1	Histone H3.3a OS=Lilium longiflorum	0.03	OrthoFinder
Cpa\|evm.model.tig00021038.65	tig00021038_g17551.t1	Histone H3.3a OS=Lilium longiflorum	0.07	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Enrichment
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Enrichment
MF	GO:0051213	dioxygenase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	34	144

External Links

No external refs found!