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  5. SymbC1.scaffold9.529

SymbC1.scaffold9.529 (9.529)


Aliases : 9.529

Description : Ribulose-phosphate 3-epimerase-like; Acetyl-CoA carboxylase; Histidine phosphatase superfamily, clade-1; Chromosome segregation/condensation protein ScpB; Acetyl-coA carboxylase zinc finger domain [Interproscan].


Gene families : OG_01_0006397 (OrthoFinder) Phylogenetic Tree(s): OG0006397_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold9.529
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_60134 60134 Acetyl-CoA carboxylase; Acetyl-coA carboxylase zinc... 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEA Interproscan
BP GO:0051304 chromosome separation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004062 aryl sulfotransferase activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR000056 Ribul_P_3_epim-like 351 544
IPR034733 AcCoA_carboxyl 839 994
IPR041010 Znf-ACC 779 804
IPR005234 ScpB_csome_segregation 51 210
IPR013078 His_Pase_superF_clade-1 564 721
No external refs found!