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  5. SymbC1.scaffold9.402

SymbC1.scaffold9.402 (9.402)


Aliases : 9.402

Description : Domain of unknown function DUF58 [Interproscan].


Gene families : OG_01_0000231 (OrthoFinder) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold9.402
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1.75 1.75 ATPase, AAA-3; Domain of unknown function DUF58;... 0.03 OrthoFinder
SymbC1.scaffold1.888 1.888 Pyrrolo-quinoline quinone repeat; RNA polymerase... 0.01 OrthoFinder
SymbC1.scaffold16.193 16.193 von Willebrand factor, type A; Aerotolerance regulator,... 0.06 OrthoFinder
SymbC1.scaffold16.194 16.194 ATPase, AAA-3; Domain of unknown function DUF58;... 0.05 OrthoFinder
SymbC1.scaffold2.1303 2.1303 Aerotolerance regulator, N-terminal; von Willebrand... 0.05 OrthoFinder
SymbC1.scaffold2.1387 2.1387 von Willebrand factor, type A; ATPase, AAA-3; Domain of... 0.02 OrthoFinder
SymbC1.scaffold2.1498 2.1498 Domain of unknown function DUF58; ATPase, AAA-3;... 0.04 OrthoFinder
SymbC1.scaffold2.2122 2.2122 Pyrrolo-quinoline quinone repeat [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold2.846 2.846 Domain of unknown function DUF58; ATPase, AAA-3;... 0.03 OrthoFinder
SymbC1.scaffold22.285 22.285 Transposase IS3/IS911family; Integrase, catalytic core;... 0.03 OrthoFinder
SymbC1.scaffold23.29 23.29 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold32647.1 32647.1 ATPase, AAA-3; ChlI/MoxR, AAA lid domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold4.396 4.396 Enoyl-(Acyl carrier protein) reductase; Domain of... 0.03 OrthoFinder
SymbC1.scaffold4.72 4.72 Protein of unknown function (DUF4381; von Willebrand... 0.04 OrthoFinder
SymbC1.scaffold5.923 5.923 Domain of unknown function DUF58; Pyrrolo-quinoline... 0.04 OrthoFinder
SymbC1.scaffold9.218 9.218 ATPase, AAA-3; Domain of unknown function DUF58;... 0.04 OrthoFinder
SymbC1.scaffold9.400 9.400 ATPase, AAA-3; ChlI/MoxR, AAA lid domain [Interproscan]. 0.06 OrthoFinder
SymbC1.scaffold9.403 9.403 PFTB repeat; Glycosyl hydrolase family 98, putative... 0.06 OrthoFinder
SymbC1.scaffold9.407 9.407 Beta-lactamase enzyme family; Domain of unknown function... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004803 transposase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005615 extracellular space IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006313 transposition, DNA-mediated IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006730 one-carbon metabolic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015159 polysaccharide transmembrane transporter activity IEP Enrichment
BP GO:0015774 polysaccharide transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0032196 transposition IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR002881 DUF58 216 311
No external refs found!