SymbC1.scaffold890.1 (890.1)


Aliases : 890.1

Description : Ribosomal protein S18 [Interproscan].


Gene families : OG_01_0002138 (OrthoFinder) Phylogenetic Tree(s): OG0002138_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold890.1
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold14393.1 14393.1 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold4034.2 4034.2 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold4519.1 4519.1 Methyltransferase domain 25 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001648 Ribosomal_S18 57 107
No external refs found!