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  5. SymbC1.scaffold881.5

SymbC1.scaffold881.5 (881.5)


Aliases : 881.5

Description : NIF system FeS cluster assembly, NifU, C-terminal; Scaffold protein Nfu/NifU, N-terminal [Interproscan].


Gene families : OG_01_0002103 (OrthoFinder) Phylogenetic Tree(s): OG0002103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold881.5
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021432.5 tig00021432_g21196.t1 Coenzyme metabolism.iron-sulfur cluster assembly... 0.02 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45238.1_1773 PRW45238 NifU mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
BP GO:0016226 iron-sulfur cluster assembly IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR001075 NIF_FeS_clus_asmbl_NifU_C 147 212
IPR014824 Nfu/NifU_N 29 115
No external refs found!