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  5. SymbC1.scaffold879.8

SymbC1.scaffold879.8 (879.8)


Aliases : 879.8

Description : Pentapeptide repeat [Interproscan].


Gene families : OG_01_0002496 (OrthoFinder) Phylogenetic Tree(s): OG0002496_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold879.8
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Cz02g00290.t1 No alias Pentapeptide repeat [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01003411.1_cds_GFH27263.1_21740 HaLaN_25559, GFH27263 Pentapeptide repeat [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 136 210
No external refs found!