SymbC1.scaffold872.1 (872.1)


Aliases : 872.1

Description : Ankyrin repeat-containing domain; Vesicle transport protein, Got1/SFT2-like [Interproscan].


Gene families : OG_01_0003069 (OrthoFinder) Phylogenetic Tree(s): OG0003069_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold872.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
EOD30445 No alias Vesicle transport protein, Got1/SFT2-like [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004451 isocitrate lyase activity IEP Enrichment
MF GO:0004556 alpha-amylase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR007305 Vesicle_transpt_Got1/SFT2 16 110
IPR020683 Ankyrin_rpt-contain_dom 421 527
IPR020683 Ankyrin_rpt-contain_dom 654 734
IPR020683 Ankyrin_rpt-contain_dom 555 637
No external refs found!