SymbC1.scaffold8671.2 (8671.2)


Aliases : 8671.2

Description : Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminal; Ribosomal protein L5 eukaryotic/L18 archaeal [Interproscan].


Gene families : OG_01_0002830 (OrthoFinder) Phylogenetic Tree(s): OG0002830_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold8671.2
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.49 tig00000194_g14777.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder
Cre14.g621450 30776682, RPL5 Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder
Cz10g29210.t1 No alias Ribosomal protein L5 eukaryotic/L18 archaeal; Ribosomal... 0.03 OrthoFinder
Dusal.0029s00017.1 33203768 Ribosomal protein L5 eukaryotic/L18 archaeal; Ribosomal... 0.03 OrthoFinder
OT_15G01250.1 No alias Ribosomal protein L5 eukaryotic/L18 archaeal,... 0.03 OrthoFinder
PTI_01G05820.1 No alias Ribosomal protein L5 eukaryotic/L18 archaeal; Ribosomal... 0.02 OrthoFinder
Sro872_g213940.1 Contig2262.g18776 60S ribosomal protein L5 0.02 OrthoFinder
Transcript_contig_79973 79973 Ribosomal protein L5 eukaryotic/L18 archaeal [Interproscan]. 0.01 OrthoFinder
XM_002501895.1 MICPUN_108173, 108173 Ribosomal protein L5 eukaryotic/L18 archaeal; Ribosomal... 0.02 OrthoFinder
lcl|BLLF01000001.1_cds_GFH05536.1_13 HaLaN_00015, GFH05536 Ribosomal_L18_c domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0008097 5S rRNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
InterPro domains Description Start Stop
IPR005485 Rbsml_L5_euk/L18_arc 14 176
IPR025607 Rbsml_L5e/L18P_C 197 301
No external refs found!