SymbC1.scaffold8622.2 (8622.2)


Aliases : 8622.2

Description : Pseudouridine synthase, RsuA/RluA; RNA-binding S4 domain [Interproscan].


Gene families : OG_01_0000056 (OrthoFinder) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold8622.2
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Cz10g24210.t1 No alias Pseudouridine synthase, RsuA/RluA [Interproscan]. 0.02 OrthoFinder
Sro810_g205780.1 Contig3420.g26656 Ribosomal large subunit pseudouridine synthase D 0.02 OrthoFinder
SymbC1.scaffold27233.1 27233.1 Pseudouridine synthase, RsuA/RluA [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR006145 PsdUridine_synth_RsuA/RluA 78 148
IPR002942 S4_RNA-bd 13 49
No external refs found!