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  5. SymbC1.scaffold8480.2

SymbC1.scaffold8480.2 (8480.2)


Aliases : 8480.2

Description : Hypothetical protein


Gene families : OG_01_0000978 (OrthoFinder) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold8480.2
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1543.1 1543.1 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold3093.3 3093.3 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold4158.6 4158.6 Hypothetical protein 0.06 OrthoFinder
SymbC1.scaffold5336.2 5336.2 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold5540.1 5540.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold5928.1 5928.1 Hypothetical protein 0.01 OrthoFinder
SymbC1.scaffold6477.4 6477.4 Hypothetical protein 0.06 OrthoFinder
SymbC1.scaffold675.8 675.8 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold8637.1 8637.1 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
BP GO:0006805 xenobiotic metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0008360 regulation of cell shape IEP Enrichment
BP GO:0010124 phenylacetate catabolic process IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
BP GO:0022604 regulation of cell morphogenesis IEP Enrichment
MF GO:0030674 protein-macromolecule adaptor activity IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0032182 ubiquitin-like protein binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0042178 xenobiotic catabolic process IEP Enrichment
BP GO:0042537 benzene-containing compound metabolic process IEP Enrichment
MF GO:0043130 ubiquitin binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
MF GO:0045301 tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!