SymbC1.scaffold847.12 (847.12)

Aliases : 847.12

Description : Domain of unknown function DUF1605; Helicase-associated domain [Interproscan].

Gene families : OG_01_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold847.12
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
Cz04g05220.t1	No alias	Helicase, C-terminal; Domain of unknown function...	0.01	OrthoFinder
Vocar.0017s0041.1	32891358	Domain of unknown function DUF1605; Helicase,...	0.01	OrthoFinder
lcl\|LHPG02000004.1_cds_PRW59127.1_7530	PRW59127	Pre-mRNA-splicing factor ATP-dependent RNA helicase...	0.01	OrthoFinder
lcl\|LHPG02000005.1_cds_PRW58375.1_7631	PRW58375	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase	0.01	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8499003.1_7956	KAA8499003	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0008094	ATPase, acting on DNA	None	Extended
MF	GO:0016887	ATPase	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Enrichment
CC	GO:0005839	proteasome core complex	IEP	Enrichment
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Enrichment
MF	GO:0070003	threonine-type peptidase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007502	Helicase-assoc_dom	2	82
IPR011709	DUF1605	141	218

External Links

No external refs found!