Cpa|evm.model.tig00020684.64 (tig00020684_g12915.t1)

Aliases : tig00020684_g12915.t1

Description : DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica

Gene families : OG_01_0000110 (OrthoFinder) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020684.64
Cluster	HCCA: Cluster_181

Target	Alias	Description	ECC score	Gene Family Method	Actions
Dusal.0676s00006.1	33185522	Helicase, C-terminal; DEAD/DEAH box helicase domain...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003774	motor activity	IEP	Enrichment
MF	GO:0003777	microtubule motor activity	IEP	Enrichment
BP	GO:0006928	movement of cell or subcellular component	IEP	Enrichment
BP	GO:0007017	microtubule-based process	IEP	Enrichment
BP	GO:0007018	microtubule-based movement	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	407	516
IPR011545	DEAD/DEAH_box_helicase_dom	199	369

External Links

No external refs found!