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  5. SymbC1.scaffold8390.1

SymbC1.scaffold8390.1 (8390.1)


Aliases : 8390.1

Description : Zinc finger, RING-CH-type; Ubiquitin-conjugating enzyme E2 [Interproscan].


Gene families : OG_01_0000606 (OrthoFinder) Phylogenetic Tree(s): OG0000606_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold8390.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_54682 54682 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000363.1_cds_GFH10980.1_5457 HaLaN_06395, GFH10980 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496998.1_727 KAA8496998 Ubiquitin-conjugating enzyme E2 J2 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
MF GO:0051032 nucleic acid transmembrane transporter activity IEP Enrichment
MF GO:0051033 RNA transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 17 125
IPR011016 Znf_RING-CH 229 280
No external refs found!