SymbC1.scaffold8222.1 (8222.1)

Aliases : 8222.1

Description : Transcription factor, GTP-binding domain; Elongation Factor G, domain II; Translation elongation factor EFTu-like, domain 2 [Interproscan].

Gene families : OG_01_0000224 (OrthoFinder) Phylogenetic Tree(s): OG0000224_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold8222.1
Cluster	HCCA: Cluster_63

Target	Alias	Description	ECC score	Gene Family Method
Cre13.g564950	30784137	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder
Cz02g31270.t1	No alias	Translation elongation factor EFG/EF2, domain IV;...	0.02	OrthoFinder
EOD10726	No alias	Elongation factor EFG, domain V-like; 116kDa U5 small...	0.02	OrthoFinder
OT_14G01740.1	No alias	Translation elongation factor EFTu-like, domain 2;...	0.02	OrthoFinder
Sro25_g016940.1	Contig1417.g13033	Elongation factor 4	0.02	OrthoFinder
Transcript_contig_54328	54328	Translation elongation factor EFTu-like, domain 2;...	0.01	OrthoFinder
Transcript_contig_57318	57318	Elongation factor EFG, domain V-like [Interproscan].	0.01	OrthoFinder
Vocar.0017s0173.1	32891421	Elongation factor EFG, domain V-like; 116kDa U5 small...	0.01	OrthoFinder
Vocar.0028s0050.1	32895521	Elongation factor EFG, domain V-like; Transcription...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004089	carbonate dehydratase activity	IEP	Enrichment
MF	GO:0004451	isocitrate lyase activity	IEP	Enrichment
MF	GO:0004620	phospholipase activity	IEP	Enrichment
MF	GO:0005543	phospholipid binding	IEP	Enrichment
MF	GO:0008289	lipid binding	IEP	Enrichment
MF	GO:0016298	lipase activity	IEP	Enrichment
MF	GO:0016833	oxo-acid-lyase activity	IEP	Enrichment
MF	GO:0035091	phosphatidylinositol binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004161	EFTu-like_2	389	465
IPR000795	T_Tr_GTP-bd_dom	18	338
IPR041095	EFG_II	481	544

External Links

No external refs found!

SymbC1.scaffold8222.1 (8222.1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation