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  5. SymbC1.scaffold822.8

SymbC1.scaffold822.8 (822.8)


Aliases : 822.8

Description : ATPase, AAA-type, core; Proteasomal ATPase OB C-terminal domain; AAA ATPase, AAA+ lid domain [Interproscan].


Gene families : OG_01_0001839 (OrthoFinder) Phylogenetic Tree(s): OG0001839_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold822.8
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Dusal.0070s00030.1 33189323 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.01 OrthoFinder
XM_002499385.1 MICPUN_78817, 78817 Proteasomal ATPase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 173 306
IPR041569 AAA_lid_3 328 372
IPR032501 Prot_ATP_ID_OB 60 115
No external refs found!