SymbC1.scaffold819.2 (819.2)

Aliases : 819.2

Description : 60S ribosomal protein L6E [Interproscan].

Gene families : OG_01_0002935 (OrthoFinder) Phylogenetic Tree(s): OG0002935_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold819.2
Cluster	HCCA: Cluster_872

Target	Alias	Description	ECC score	Gene Family Method
Cz11g06080.t1	No alias	60S ribosomal protein L6E [Interproscan].	0.01	OrthoFinder
Dusal.0521s00006.1	33197395	60S ribosomal protein L6E [Interproscan].	0.02	OrthoFinder
OT_09G04060.1	No alias	60S ribosomal protein L6E [Interproscan].	0.01	OrthoFinder
PTI_04G05480.1	No alias	60S ribosomal protein L6E [Interproscan].	0.01	OrthoFinder
Sro189_g081570.1	Contig744.g8521	60S ribosomal protein L6	0.01	OrthoFinder
Sro68_g038220.1	Contig2027.g17403	60S ribosomal protein L6	0.01	OrthoFinder
XM_003059548.1	MicpuC2_49628, 49628	60S ribosomal protein L6E [Interproscan].	0.01	OrthoFinder
lcl\|LHPG02000006.1_cds_PRW57743.1_8428	PRW57743	60S ribosomal L6	0.04	OrthoFinder
lcl\|VRMN01000003.1_cds_KAA8495926.1_1924	KAA8495926	60S ribosomal protein L6	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000915	60S_ribosomal_L6E	75	160

External Links

No external refs found!

SymbC1.scaffold819.2 (819.2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation