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  5. SymbC1.scaffold7969.3

SymbC1.scaffold7969.3 (7969.3)


Aliases : 7969.3

Description : Glycoside hydrolase family 2, catalytic domain; Domain of unknown function DUF4982; Glycoside hydrolase family 2, domain 5 [Interproscan].


Gene families : OG_01_0010155 (OrthoFinder) Phylogenetic Tree(s): OG0010155_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold7969.3
Cluster HCCA: Cluster_93


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
InterPro domains Description Start Stop
IPR032311 DUF4982 354 414
IPR040605 Glyco_hydro2_dom5 438 531
IPR006103 Glyco_hydro_2_cat 53 131
IPR006103 Glyco_hydro_2_cat 136 215
No external refs found!