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  5. SymbC1.scaffold793.3

SymbC1.scaffold793.3 (793.3)


Aliases : 793.3

Description : ABC transporter-like [Interproscan].


Gene families : OG_01_0000392 (OrthoFinder) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold793.3
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Cre04.g222700 30791597 ABC transporter F family member 1 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cz03g12130.t1 No alias Chromo domain; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Cz13g02110.t1 No alias Four helical bundle domain; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
EOD13110 No alias ABC transporter-like [Interproscan]. 0.02 OrthoFinder
OT_02G04850.1 No alias ABC transporter-like [Interproscan]. 0.01 OrthoFinder
PTI_09G04380.1 No alias ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Sro1610_g285810.1 Contig4416.g33186 [NU+] prion formation protein 1 0.02 OrthoFinder
Vocar.0024s0005.1 32890284 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
XM_003061895.1 MicpuC2_28864, 28864 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW56995.1_8974 PRW56995 Elongation factor 3 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498338.1_7291 KAA8498338 Elongation factor 3B 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004357 glutamate-cysteine ligase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006750 glutathione biosynthetic process IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 392 544
IPR003439 ABC_transporter-like_ATP-bd 668 711
No external refs found!