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  5. SymbC1.scaffold789.7

SymbC1.scaffold789.7 (789.7)


Aliases : 789.7

Description : Short-chain dehydrogenase/reductase SDR [Interproscan].


Gene families : OG_01_0000065 (OrthoFinder) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold789.7
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Sro63_g035640.1 Contig2778.g22329 Short-chain dehydrogenase TIC 32, chloroplastic 0.01 OrthoFinder
Sro926_g221080.1 Contig4614.g34433 Daunorubicin C-13 ketoreductase DnrU 0.01 OrthoFinder
Transcript_contig_90028 90028 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0008375 acetylglucosaminyltransferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Enrichment
InterPro domains Description Start Stop
IPR002347 SDR_fam 232 380
No external refs found!