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  5. SymbC1.scaffold786.3

SymbC1.scaffold786.3 (786.3)


Aliases : 786.3

Description : Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan].


Gene families : OG_01_0000061 (OrthoFinder) Phylogenetic Tree(s): OG0000061_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold786.3
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000551.10 tig00000551_g2032.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00020685.29 tig00020685_g12945.t1 No description available 0.02 OrthoFinder
Cre02.g117350 30786487 No description available 0.01 OrthoFinder
Cre02.g146650 30785127 No description available 0.01 OrthoFinder
Cre04.g212550 30791327 No description available 0.01 OrthoFinder
Cre09.g403108 30781536 No description available 0.01 OrthoFinder
Cre17.g699500 30781967 No description available 0.02 OrthoFinder
Dusal.0282s00008.1 33199289 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.01 OrthoFinder
Dusal.0779s00005.1 33187351 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.03 OrthoFinder
EOD09199 No alias Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.01 OrthoFinder
OT_07G03340.1 No alias Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold776.23 776.23 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.05 OrthoFinder
Vocar.0001s0262.1 32886040 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.02 OrthoFinder
Vocar.0001s1535.1 32884574 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.02 OrthoFinder
Vocar.0007s0203.1 32887988 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.01 OrthoFinder
Vocar.0014s0182.1 32888601 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.01 OrthoFinder
XM_002502164.1 MICPUN_82271, 82271 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.02 OrthoFinder
XM_002505321.1 MICPUN_86576, 86576 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.02 OrthoFinder
XM_003061892.1 MicpuC2_2514, 2514 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006464 cellular protein modification process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0005544 calcium-dependent phospholipid binding IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
InterPro domains Description Start Stop
IPR004344 TTL/TTLL_fam 400 595
No external refs found!