SymbC1.scaffold7840.1 (7840.1)

Aliases : 7840.1

Description : Tyrosine-protein kinase ephrin type A/B receptor-like; ABC-type glycine betaine transport system, substrate-binding domain [Interproscan].

Gene families : OG_01_0000166 (OrthoFinder) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold7840.1
Cluster	HCCA: Cluster_58

Target	Alias	Description	ECC score	Gene Family Method
SymbC1.scaffold1273.15	1273.15	Tyrosine-protein kinase ephrin type A/B receptor-like...	0.02	OrthoFinder
SymbC1.scaffold1693.6	1693.6	Hypothetical protein	0.02	OrthoFinder
SymbC1.scaffold2266.6	2266.6	Hypothetical protein	0.03	OrthoFinder
SymbC1.scaffold2615.1	2615.1	Hypothetical protein	0.02	OrthoFinder
SymbC1.scaffold2690.6	2690.6	Tyrosine-protein kinase ephrin type A/B receptor-like...	0.03	OrthoFinder
SymbC1.scaffold3181.2	3181.2	Tyrosine-protein kinase ephrin type A/B receptor-like...	0.03	OrthoFinder
SymbC1.scaffold3486.5	3486.5	Hypothetical protein	0.03	OrthoFinder
SymbC1.scaffold4014.6	4014.6	Tyrosine-protein kinase ephrin type A/B receptor-like...	0.03	OrthoFinder
SymbC1.scaffold629.10	629.10	ABC-type glycine betaine transport system,...	0.04	OrthoFinder
SymbC1.scaffold6696.1	6696.1	Hypothetical protein	0.03	OrthoFinder
SymbC1.scaffold739.3	739.3	Hypothetical protein	0.03	OrthoFinder
SymbC1.scaffold8678.1	8678.1	Tyrosine-protein kinase ephrin type A/B receptor-like;...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0022857	transmembrane transporter activity	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043190	ATP-binding cassette (ABC) transporter complex	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0098533	ATPase dependent transmembrane transport complex	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
CC	GO:1902495	transmembrane transporter complex	None	Extended
CC	GO:1904949	ATPase complex	None	Extended
CC	GO:1990351	transporter complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Enrichment
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Enrichment
MF	GO:0004609	phosphatidylserine decarboxylase activity	IEP	Enrichment
MF	GO:0005216	ion channel activity	IEP	Enrichment
MF	GO:0005509	calcium ion binding	IEP	Enrichment
MF	GO:0015267	channel activity	IEP	Enrichment
MF	GO:0016859	cis-trans isomerase activity	IEP	Enrichment
MF	GO:0022803	passive transmembrane transporter activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011641	Tyr-kin_ephrin_A/B_rcpt-like	486	534
IPR007210	ABC_Gly_betaine_transp_sub-bd	306	400

External Links

No external refs found!

SymbC1.scaffold7840.1 (7840.1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation