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  5. SymbC1.scaffold7723.1

SymbC1.scaffold7723.1 (7723.1)


Aliases : 7723.1

Description : DDE superfamily endonuclease domain [Interproscan].


Gene families : OG_01_0005067 (OrthoFinder) Phylogenetic Tree(s): OG0005067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold7723.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold14937.1 14937.1 DDE superfamily endonuclease domain; HTH CenpB-type... 0.07 OrthoFinder
SymbC1.scaffold508.1 508.1 Ankyrin repeats (many copies); DDE superfamily... 0.03 OrthoFinder
SymbC1.scaffold5876.1 5876.1 DDE superfamily endonuclease domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold6211.1 6211.1 Hypothetical protein 0.02 OrthoFinder
SymbC1.scaffold7723.4 7723.4 DDE superfamily endonuclease domain [Interproscan]. 0.11 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004526 ribonuclease P activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0051304 chromosome separation IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR004875 DDE_SF_endonuclease_dom 213 314
No external refs found!