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  5. SymbC1.scaffold7547.3

SymbC1.scaffold7547.3 (7547.3)


Aliases : 7547.3

Description : DEAD/DEAH box helicase domain; Helicase, C-terminal [Interproscan].


Gene families : OG_01_0000509 (OrthoFinder) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold7547.3
Cluster HCCA: Cluster_64


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 801 979
IPR001650 Helicase_C 1016 1128
No external refs found!