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  5. Cpa|evm.model.tig00000137.5

Cpa|evm.model.tig00000137.5 (tig00000137_g8139.t1)


Aliases : tig00000137_g8139.t1

No description available


Gene families : OG_01_0003403 (OrthoFinder) Phylogenetic Tree(s): OG0003403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000137.5
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
OT_05G02760.1 No alias RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder
PTI_06G04710.1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Sro1165_g248050.1 Contig3103.g24676 MKI67 FHA domain-interacting nucleolar phosphoprotein 0.02 OrthoFinder
UNPLg00220.t1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
XM_003056901.1 MicpuC2_7373, 7373 RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45663.1_1278 PRW45663 MKI67 FHA domain-interacting nucleolar phospho 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495668.1_1666 KAA8495668 MKI67 FHA domain-interacting nucleolar phosphoprotein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 269 338
No external refs found!