1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold714.9

SymbC1.scaffold714.9 (714.9)


Aliases : 714.9

Description : Cation-transporting P-type ATPase, N-terminal; Reverse transcriptase, RNA-dependent DNA polymerase; E1-E2 ATPase; haloacid dehalogenase-like hydrolase; Cation-transporting P-type ATPase, C-terminal [Interproscan].


Gene families : OG_01_0000503 (OrthoFinder) Phylogenetic Tree(s): OG0000503_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold714.9
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
EOD05316 No alias haloacid dehalogenase-like hydrolase;... 0.01 OrthoFinder
EOD28602 No alias Cation-transporting P-type ATPase, N-terminal; haloacid... 0.02 OrthoFinder
EOD30741 No alias Ca2+ ATPase [Ensembl]. 0.02 OrthoFinder
EOD35019 No alias Ca2+ ATPase [Ensembl]. 0.01 OrthoFinder
OT_03G04950.1 No alias Cation transport ATPase (P-type); Cation-transporting... 0.02 OrthoFinder
Transcript_contig_89923 89923 Cation-transporting P-type ATPase, C-terminal [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499524.1_8477 KAA8499524 Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 1241 1362
IPR004014 ATPase_P-typ_cation-transptr_N 1930 1996
IPR006068 ATPase_P-typ_cation-transptr_C 2727 2944
No external refs found!