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  5. Cpa|evm.model.tig00020629.95

Cpa|evm.model.tig00020629.95 (tig00020629_g12416.t1)


Aliases : tig00020629_g12416.t1

Description : Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana


Gene families : OG_01_0000421 (OrthoFinder) Phylogenetic Tree(s): OG0000421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020629.95
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Cre16.g693700 30777449, UBC9 Protein degradation.peptide... 0.01 OrthoFinder
Cz09g17240.t1 No alias Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.02 OrthoFinder
Cz16g21070.t1 No alias Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.04 OrthoFinder
OT_05G02570.1 No alias Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.06 OrthoFinder
Sro2183_g318050.1 Contig2199.g18316 Conjugating enzyme E2 0.09 OrthoFinder
TP04G07610.1 No alias Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.01 OrthoFinder
Transcript_contig_59824 59824 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.01 OrthoFinder
XM_002502136.1 MICPUN_81538, 81538 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.01 OrthoFinder
XM_003056887.1 MicpuC2_46797, 46797 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.05 OrthoFinder
XM_003059525.1 MicpuC2_44427, 44427 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.03 OrthoFinder
XM_003063672.1 MicpuC2_36703, 36703 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50870.1_830 PRW50870 Ubiquitin-conjugating enzyme E2 T 0.02 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39297.1_2662 PRW39297 Ubiquitin-conjugating enzyme E2 28-like 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005548 phospholipid transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 58 118
IPR000608 UBQ-conjugat_E2 8 57
No external refs found!