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  5. SymbC1.scaffold6896.1

SymbC1.scaffold6896.1 (6896.1)


Aliases : 6896.1

Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6896.1
Cluster HCCA: Cluster_860

Target Alias Description ECC score Gene Family Method Actions
EOD09224 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
OT_03G00440.1 No alias Hypothetical protein 0.01 OrthoFinder
SymbC1.scaffold178.6 178.6 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold809.9 809.9 Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold9287.4 9287.4 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0398.1 32884606 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499741.1_8694 KAA8499741 E3 ubiquitin-protein ligase 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492818.1_2554 KAA8492818 RING finger protein 24 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 396 444
No external refs found!