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  5. Cpa|evm.model.tig00020629.39

Cpa|evm.model.tig00020629.39 (tig00020629_g12361.t1)


Aliases : tig00020629_g12361.t1

Description : RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.SRm160 component


Gene families : OG_01_0003546 (OrthoFinder) Phylogenetic Tree(s): OG0003546_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020629.39
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
Cre16.g678050 30778075 RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder
TP06G07480.1 No alias PWI domain [Interproscan]. 0.01 OrthoFinder
XM_003055777.1 MicpuC2_9298, 9298 PWI domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0034464 BBSome IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002483 PWI_dom 48 117
No external refs found!