1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold687.13

SymbC1.scaffold687.13 (687.13)


Aliases : 687.13

Description : DEAD/DEAH box helicase domain; Helicase, C-terminal [Interproscan].


Gene families : OG_01_0000110 (OrthoFinder) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold687.13
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
EOD31868 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
Vocar.0001s1417.1 32884498 DEAD/DEAH box helicase domain; Helicase, C-terminal... 0.02 OrthoFinder
Vocar.0006s0453.1 32893870 DEAD/DEAH box helicase domain; Helicase, C-terminal... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0030248 cellulose binding IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 244 345
IPR011545 DEAD/DEAH_box_helicase_dom 3 177
No external refs found!