SymbC1.scaffold685.10 (685.10)

Aliases : 685.10

Description : Carbamoyl-phosphate synthase small subunit, N-terminal domain; Mitochondrial fission protein ELM1-like; Transcription elongation factor, GreA/GreB, C-terminal; Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain; Methylglyoxal synthase-like domain; Carbamoyl-phosphate synthetase, large subunit oligomerisation domain; Glutamine amidotransferase; Transcription elongation factor, GreA/GreB, N-terminal [Interproscan].

Gene families : OG_01_0000742 (OrthoFinder) Phylogenetic Tree(s): OG0000742_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: SymbC1.scaffold685.10
Cluster HCCA: Cluster_144

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0032784 regulation of DNA-templated transcription, elongation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR017926 GATASE 208 366
IPR009367 Elm1-like 1360 1657
IPR001437 Tscrpt_elong_fac_GreA/B_C 1131 1204
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 652 854
IPR022691 Tscrpt_elong_fac_GreA/B_N 1053 1123
IPR011607 MGS-like_dom 936 1021
IPR005480 CarbamoylP_synth_lsu_oligo 431 549
IPR002474 CarbamoylP_synth_ssu_N 16 142
No external refs found!