- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : tig00000135_g7967.t1
Description : Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana
Gene families : OG_01_0000262 (OrthoFinder) Phylogenetic Tree(s): OG0000262_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00000135.1 | |
| Cluster | HCCA: Cluster_17 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre17.g721500 | 30782074 | Carbohydrate metabolism.starch... | 0.02 | OrthoFinder | |
| Cz01g24310.t1 | No alias | Starch synthase, catalytic domain; Glycosyl transferase,... | 0.03 | OrthoFinder | |
| Cz12g15250.t1 | No alias | Starch synthase, catalytic domain; Glycosyl transferase,... | 0.02 | OrthoFinder | |
| Vocar.0001s1467.1 | 32885239 | Glycosyl transferase, family 1; Starch synthase,... | 0.02 | OrthoFinder | |
| lcl|BLLF01000151.1_cds_GFH08295.1_2772 | HaLaN_03235, GFH08295 | Starch synthase, chloroplastic/amyloplastic | 0.04 | OrthoFinder | |
| lcl|LHPG02000003.1_cds_PRW59930.1_6319 | PRW59930 | Granule-bound starch synthase chloroplastic amyloplastic-like | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004601 | peroxidase activity | IEP | Enrichment |
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Enrichment |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Enrichment |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Enrichment |
| BP | GO:0006096 | glycolytic process | IEP | Enrichment |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Enrichment |
| BP | GO:0006757 | ATP generation from ADP | IEP | Enrichment |
| BP | GO:0006979 | response to oxidative stress | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| BP | GO:0008202 | steroid metabolic process | IEP | Enrichment |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | Enrichment |
| CC | GO:0009507 | chloroplast | IEP | Enrichment |
| CC | GO:0009521 | photosystem | IEP | Enrichment |
| CC | GO:0009522 | photosystem I | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| CC | GO:0009536 | plastid | IEP | Enrichment |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
| MF | GO:0010242 | oxygen evolving activity | IEP | Enrichment |
| BP | GO:0015979 | photosynthesis | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Enrichment |
| BP | GO:0016125 | sterol metabolic process | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Enrichment |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Enrichment |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | Enrichment |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Enrichment |
| BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
| CC | GO:0030076 | light-harvesting complex | IEP | Enrichment |
| CC | GO:0030089 | phycobilisome | IEP | Enrichment |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0046031 | ADP metabolic process | IEP | Enrichment |
| BP | GO:0046034 | ATP metabolic process | IEP | Enrichment |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | Enrichment |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
| No external refs found! |