1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold674.11

SymbC1.scaffold674.11 (674.11)


Aliases : 674.11

Description : RNA-binding S4 domain [Interproscan].


Gene families : OG_01_0003059 (OrthoFinder) Phylogenetic Tree(s): OG0003059_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold674.11
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Cre08.g359750 30774125, RPS9 40S ribosomal protein S9-1 OS=Arabidopsis thaliana 0.02 OrthoFinder
EOD28183 No alias Ribosomal protein S4/S9, N-terminal; RNA-binding S4... 0.01 OrthoFinder
PTI_07G00150.1 No alias Ribosomal protein S4/S9, N-terminal; RNA-binding S4... 0.03 OrthoFinder
Sro789_g202650.1 Contig1895.g16481 40S ribosomal protein S9 0.03 OrthoFinder
XM_002500563.1 MICPUN_93744, 93744 RNA-binding S4 domain; Ribosomal protein S4/S9,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002942 S4_RNA-bd 48 91
No external refs found!