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  5. SymbC1.scaffold670.3

SymbC1.scaffold670.3 (670.3)


Aliases : 670.3

Description : JmjC domain [Interproscan].


Gene families : OG_01_0006619 (OrthoFinder) Phylogenetic Tree(s): OG0006619_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold670.3
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Sro1908_g304710.1 Contig1938.g16671 Cupin superfamily protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0035145 exon-exon junction complex IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR003347 JmjC_dom 177 384
No external refs found!