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  5. SymbC1.scaffold663.3

SymbC1.scaffold663.3 (663.3)


Aliases : 663.3

Description : Ankyrin repeat-containing domain [Interproscan].


Gene families : OG_01_0000372 (OrthoFinder) Phylogenetic Tree(s): OG0000372_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold663.3
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cz15g05050.t1 No alias HECT domain; E3 ubiquitin ligase, domain of unknown... 0.02 OrthoFinder
PTI_14G01540.1 No alias HECT domain [Interproscan]. 0.01 OrthoFinder
Sro1025_g232790.1 Contig568.g7230 Probable E3 ubiquitin-protein ligase hulA 0.01 OrthoFinder
Vocar.0045s0037.1 32887770 E3 ubiquitin ligase, domain of unknown function DUF913;... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 961 1024
IPR020683 Ankyrin_rpt-contain_dom 235 301
IPR020683 Ankyrin_rpt-contain_dom 894 959
IPR020683 Ankyrin_rpt-contain_dom 310 403
IPR020683 Ankyrin_rpt-contain_dom 1028 1103
No external refs found!