SymbC1.scaffold651.13 (651.13)

Aliases : 651.13

Description : Aprataxin and PNK-like factor, PBZ domain; Peptidase C2, calpain, catalytic domain [Interproscan].

Gene families : OG_01_0000213 (OrthoFinder) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold651.13
Cluster	HCCA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
SymbC1.scaffold12816.1	12816.1	Peptidase C2, calpain, catalytic domain [Interproscan].	0.01	OrthoFinder
SymbC1.scaffold1416.6	1416.6	Peptidase C2, calpain, catalytic domain; EF-hand domain...	0.01	OrthoFinder
SymbC1.scaffold538.1	538.1	Peptidase C2, calpain, catalytic domain [Interproscan].	0.02	OrthoFinder
SymbC1.scaffold6050.1	6050.1	Hypothetical protein	0.02	OrthoFinder
SymbC1.scaffold947.16	947.16	Peptidase C2, calpain, catalytic domain; EF-hand domain...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004197	cysteine-type endopeptidase activity	None	Extended
MF	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005216	ion channel activity	IEP	Enrichment
MF	GO:0015267	channel activity	IEP	Enrichment
MF	GO:0022803	passive transmembrane transporter activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001300	Peptidase_C2_calpain_cat	25	266
IPR019406	APLF_PBZ	382	403

External Links

No external refs found!