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  5. SymbC1.scaffold647.2

SymbC1.scaffold647.2 (647.2)


Aliases : 647.2

Description : Beta-Casp domain; Metallo-beta-lactamase [Interproscan].


Gene families : OG_01_0001543 (OrthoFinder) Phylogenetic Tree(s): OG0001543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold647.2
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020911.27 tig00020911_g15729.t1 Cleavage and polyadenylation specificity factor subunit... 0.02 OrthoFinder
XM_002508759.1 MICPUN_85708, 85708 Beta-Casp domain; Pre-mRNA 3'-end-processing... 0.02 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05865.1_6044 PRW05865 Cleavage and polyadenylation specificity factor subunit 3 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006665 sphingolipid metabolic process IEP Enrichment
BP GO:0006672 ceramide metabolic process IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 52 216
IPR022712 Beta_Casp 268 377
No external refs found!