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  5. SymbC1.scaffold6463.2

SymbC1.scaffold6463.2 (6463.2)


Aliases : 6463.2

Description : Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; CobW/HypB/UreG, nucleotide-binding domain [Interproscan].


Gene families : OG_01_0000111 (OrthoFinder) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold6463.2
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cz09g05180.t1 No alias Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.01 OrthoFinder
Dusal.1170s00001.1 33187782 Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.01 OrthoFinder
SymbC1.scaffold1504.3 1504.3 CobW/HypB/UreG, nucleotide-binding domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01003418.1_cds_GFH27281.1_21758 HaLaN_25577, GFH27281 COBW domain-containing protein 1 0.02 OrthoFinder
lcl|BLLF01005918.1_cds_GFH31763.1_26240 HaLaN_30869, GFH31763 WW domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59349.1_7459 PRW59349 Cobalamin biosynthesis 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498306.1_7259 KAA8498306 Putative metal chaperone YciC 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0018580 nitronate monooxygenase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003495 CobW/HypB/UreG_dom 128 201
IPR003495 CobW/HypB/UreG_dom 202 293
IPR011629 Cbl_biosynth_CobW-like_C 338 431
No external refs found!