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  5. SymbC1.scaffold6447.3

SymbC1.scaffold6447.3 (6447.3)


Aliases : 6447.3

Description : Domain of unknown function DUF1605; Helicase-associated domain; Helicase, C-terminal [Interproscan].


Gene families : OG_01_0000288 (OrthoFinder) Phylogenetic Tree(s): OG0000288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6447.3
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold3701.3 3701.3 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004565 beta-galactosidase activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
CC GO:0009341 beta-galactosidase complex IEP Enrichment
MF GO:0015925 galactosidase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
InterPro domains Description Start Stop
IPR011709 DUF1605 1914 1981
IPR007502 Helicase-assoc_dom 1768 1851
IPR001650 Helicase_C 1555 1705
No external refs found!