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  5. SymbC1.scaffold6444.6

SymbC1.scaffold6444.6 (6444.6)


Aliases : 6444.6

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000622 (OrthoFinder) Phylogenetic Tree(s): OG0000622_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6444.6
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold193.13 193.13 Cyclic nucleotide-binding domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold4057.4 4057.4 Ion transport domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0005544 calcium-dependent phospholipid binding IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0019236 response to pheromone IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 203 452
No external refs found!